Cellulose-binding domains

Cellulose-binding domains

(Parte 5 de 6)

Kleinman HK, Luckenbill-Edds L, Cannon FW, Sephel GC. Use of extracellular matrix components for cell culture. Anal

Kroon PA, Williamson G, Fish NM, Archer DB, Belshaw NJ. A modular esterase from Penicillium funiculosum which releases ferulic acid from plant cell walls and binds crystalline cellulose contains a carbohydrate binding module. Eur J Biochem 2000;267:6740–52.

Krull LH, Dintzis FR, Griffin HL, Baker FL. A microfibril-generating factor from the cellulase of Trichoderma reesei. Biotechnol Bioeng 1988;31:321–7.

Kulkarni N, Shendye A, Rao M. Molecular and biotechnological aspects of xylanases. FEMS Microbiol Rev 1999;23:411–56. Le Nguyen D, Heitz A, Chiche L, Castro B, Boigegrain RA, Favel A, Coletti-Previero MA. Molecular recognition between serine proteases and new bioactive microproteins with a knotted structure. Biochimie 1990;72:431–5.

Lee I, Evans BR, Woodward J. The mechanism of cellulase action on cotton fibers: evidence from atomic force microscopy.

Lehtio J, Teeri T, Nygren PA. Alpha-amylase inhibitors selected from a combinatorial library of a cellulose binding domain scaffold. Proteins 2000;41:316–2.

Lehtio J, Wernerus H, Samuelson P, Teeri T, Stahl S. Directed immobilization of recombinant staphylococci on cotton fibers by functional display of a fungal cellulose-binding domain. FEMS Microbiol Lett 2001;195:197–204.

Levy I, Shoseyov O. Expression, refolding and indirect immobilization of horseradish peroxidase (HRP) to cellulose via a phageselected peptide and cellulose-binding domain (CBD). J Pept Sci 2002;7:50–7.

Levy I, Nussinovitch A, Shoseyov A. Modification of polysaccharide containing materials, 2001 (WO01/34091A2, PCT). Levy I, Shani Z, Shoseyov O. Modification of polysaccharides and plant cell wall by endo-1,4-b-glucanase and cellulose-binding domains. Biomol Eng 2002a (In press).

Levy I, Nussinovitch A, Shpigel E, Shoseyov O. Recombinant cellulose crosslinking protein: a novel paper-modification biomaterial. Cellulose 2002b (In press).

Limon MC, Margolles-Clark E, Benitez T, Penttila M. Addition of substrate-binding domains increases substrate-binding capacity and specific activity of a chitinase from Trichoderma harzianum. FEMS Microbiol Lett 2001;198:57–63.

Linder M, Lindeberg G, Reinikainen T, Teeri T, Pettersson G. The difference in affinity between two fungal cellulose-binding domains is dominated by a single amino acid substitution. FEBS Lett 1995;372:96–8.

Linder M, Salovuori I, Ruohonen L, Teeri T. Characterization of a double cellulose-binding domain. Synergistic high affinity binding to crystalline cellulose. J Biol Chem 1996;271:21268–72.

Linder M, Margolles-Clark E, Reinikainen T, Teeri T. Trichoderma reesei cellobiohydrolase I with an endoglucanase cellulosebinding domain: action on bacterial microcrystalline cellulose. J Biotechnol 1997;57:49–57.

Linder M, Nevanen T, Soderholm L, Bengs O, Teeri T. Improved immobilization of fusion proteins via cellulose-binding domains. Biotechnol Bioeng 1998;60:642–7.

Linder M, Nevanen T, Teeri T. Design of a pH-dependent cellulose-binding domain. FEBS Lett 1999;447:13–6. Lowe CR. Combinatorial approaches to affinity chromatography. Curr Opin Chem Biol 2001;5:248–56. Lymar ES, Li B, Renganathan V. Purification and characterization of a cellulose-binding beta-glucosidase from cellulosedegrading cultures of Phanerochaete chrysosporium. Appl Environ Microbiol 1995;61:2976–80.

Margolles-Clark E, Tenkanen M, Soderlund H, Pentilla M. Acetyl xylan esterase from Trichoderma reesei contains an active site serine and a cellulose-binding domain. Eur J Biochem 1996;237:553–60.

Mattinen ML, Linder M, Drakenberg T, Annila A. Solution structure of the cellulose-binding domain of endoglucanase I from

Trichoderma reesei and its interaction with cello-oligosaccharides. Eur J Biochem 1998;256:279–86.

McLean BW, Bray MR, Boraston AB, Gilkes NR, Haynes CA, Kilburn DG. Analysis of binding of the family 2a carbohydratebinding module from Cellulomonas fimi xylanase 10A to cellulose: specificity and identification of functionally important amino acid residues. Protein Eng 2000;13:801–9.

Meade H. Method of purifying heterologous proteins (WO/61725A1, PCT). Meade H, Fulton SP, Echelard Y. Methods of producing a target molecule in transgenic animal and purification of the target molecule (WO126455A1, PCT).

Miettinen-Oinonen A, Londesborough J, Vehmaanpera J, Haakana H, Mantyla A, Lantto R, Elovainio M, Joutsjoki V, Paloheimo

M, Suominen P. Cellulases, the genes encoding them and uses thereof. US patent 6,184,019, 2001.

Moks T, Abrahmsen L, Nilsson B, Hellman U, Sjoquist J, Uhlen M. Staphylococcal protein A consists of five IgG-binding domains. Eur J Biochem 1986;156:637–43.

Mordoccoa A, Kuek C, Jenkinsa R. Continuous degradation of phenol at low concentration using immobilized Pseudomonas putida. Enzyme Microb Technol 1999;25:530–6.

Nagy T, Simpson P, Williamson MP, Hazlewood GP, Gilbert HJ, Orosz L. All three surface tryptophans in Type IIa cellulose binding domains play a pivotal role in binding both soluble and insoluble ligands. FEBS Lett 1998;429: 312–6.

Nigam JN. Continuous ethanol production from pineapple cannery waste using immobilized yeast cells. J Biotechnol 2000;80:189–93.

Notenboom V, Boraston AB, Kilburn DG, Rose DR. Crystal structures of the family 9 carbohydrate-binding module from

Thermotoga maritime xylanase 10A in native and ligand-bound forms. Biochemistry 2001;40:6248–56.

Novy R, Yaeger K, Monsma S, McCormick M, Berg J, Shoseyov O, Shpigel E, Seigel D, Goldlust A, Efroni G, Singer Y,

Kilburn D, Tomme P, Gilkes N. Cellulose binding domain expression vectors for the rapid, low cost purification of CBD- fusion proteins. FASEB J 1997;1:1715.

Ong E, Greenwood JM, Gilkes NR, Kilburn DG, Miler RC, Warren AJ. The cellulose-binding domain of cellulases: tools for biotechnology. Trends Biotechnol 1989;7:239–43.

Otomo T, Teruya K, Uegaki K, Yamazaki T, Kyogoku Y. Improved segmental isotope labeling of proteins and application to a larger protein. J Biomol NMR 1999;14:105–14.

Pala H, Lemos MA, Mota M, Gama FM. Enzymatic upgrade of old paperboard containers. Enzyme Microb Technol 2001;29:274–9.

Phelps MR, Hobbs JB, Kilburn DG, Turner RFB. Technology for regenerable biosensor probes based on enzyme cellulosebinding domain conjugates. Biotechnol Prog 1994;10:433–40.

Phelps MR, Hobbs JB, Kilburn DG, Turner RFB. An autoclavable glucose biosensor for microbial fermentation monitoring and control. Biotechnol Bioeng 1995;46:514–24.

Pilkington FH, Margaritis A, Mensour NA. Mass transfer characteristics of immobilized cells used in fermentation processes.

Crit Rev Biotechnol 1998;18:237–5.

Rechter M, Lider O, Cahalon L, Baharav E, Dekel M, Seigel D, Vlodavsky I, Aingorn H, Cohen IR, Shoseyov O. A cellulosebinding domain-fused recombinant human T cell connective tissue-activating peptide-I manifests heparanase activity. Biochem Biophys Res Commun 1999;255:657–62.

Reese ET, Sui RGH, Levinson HS. Biological degradation of soluble cellulose derivatives. J Bacteriol 1950;59:479–85. Richins RD, Mulchandani A, Chen W. Expression, immobilization, and enzymatic characterization of cellulose-binding domainorganophosphorus hydrolase fusion enzymes. Biotechnol Bioeng 2000;69:591–6.

Roberts JC. The chemistry of paper Cambridge, UK: The Royal Society of Chemistry, 1996. Rodi DJ, Makowski L. Phage-display technology—finding a needle in a vast molecular haystack. Curr Opin Biotechnol 1999;10:87–93.

Ross P, Mayer R, Benziman M. Cellulose biosynthesis and function bacteria. Microbiol Rev 1991;5:35–58. Rotticci-Mulder JC, Gustavsson M, Holmquist M, Hult K, Martinelle M. Expression in Pichia pastoris of Candida antarctica lipase B and lipase B fused to a cellulose-binding domain. Protein Expression Purif 2001;21:386–92.

Sakon J, Irwin D, Wilson DB, Karplus PA. Structure and mechanism of endo/exocellulase E4 from Thermomonospora fusca. Nat

Saleemuddin M. Bioaffinity based immobilization of enzymes. Adv Biochem Eng/Biotechnol 1999;64:203–26. Samuelson P, Wernerus H, Svedberg M, Stahl S. Staphylococcal surface display of metal-binding polyhistidyl peptides. Appl Environ Microbiol 2000;6:1243–8.

Scheller FW, Wollenberger U, Warsinke A, Lisdat F. Research and development in biosensors. Curr Opin Biotechnol 2001;12:35–40.

Schwab C, Bosshard HR. Caveats for the use of surface-adsorbed protein antigen to test the specificity of antibodies. J Immunol

Shani Z. The effect of endo-1,4-b-glucanase and cellulose-binding domain on plant cell elongation. PhD Thesis, The Hebrew

University of Jerusalem, Rehovot, Israel, 2000.

Shani Z, Shoseyov O. Process of expressing and isolating recombinant proteins and recombinant protein products from plants, plant derived tissues or cultured plant cells. US patent 6,331,416, 2001.

Shani Z, Dekel M, Tsabary G, Shoseyov O. Cloning and characterization of elongation specific endo-1,4-b-glucanase (cel1) from

Arabidopsis thaliana. Plant Mol Biol 1997;34:837–42.

Shani Z, Dekel M, Sig Jensen C, Tzfira T, Goren R, Altman A, Shoseyov O. Arabidopsis thaliana endo-1,4-b-glucanase (cel1) promoter mediates uidA expression in elongating tissues of aspen (Populus tremula). J Plant Physiol 2000;156:118–20.

Shoseyov O. Kits and methods of detection using cellulose binding domain fusion proteins. US patent 5,738,984, 1998. Shoseyov O, Doi RH. Essential 170-kDa subunit for degradation of crystalline cellulose by Clostridium cellulovorans cellulase.

Proc Natl Acad Sci USA 1990;87:2192–5.

Shoseyov O, Hamamoto T, Foong F, Doi RH. Cloning of Clostridium cellulovorans endo-1,4-beta-glucanase genes. Biochem

Shoseyov O, Shpigel I, Goldstein M, Doi R. Methods of use of cellulose binding domain proteins. US patent 5,670,623, 1997. Shoseyov O, Shpigel I, Goldstein M, Doi R. Cellulose binding domain proteins. US patent 5,837,814, 1998a. Shoseyov O, Shpigel I, Goldstein M, Doi R. Cellulose binding domain fusion proteins. US patent 5,719,044, 1998b. Shoseyov O, Shpigel I, Goldstein MA, Doi RH. Methods of detection using a cellulose binding domain fusion product. US patent 5, 856, 201, 1999.

Shoseyov O, Shani Z, Shpigel E. Transgenic plants of altered morphology. US patent 6,184,440, 2001. Shpigel E, Roiz L, Goren R, Shoseyov O. Bacterial cellulose-binding domain modulates in-vitro elongation of different plant cells. Plant Physiol 1998a;117:1185–94.

Shpigel E, Elias D, Cohen IR, Shoseyov O. Production and purification of a recombinant human hsp60 epitope using the cellulose-binding domain in Escherichia coli. Protein Expression Purif 1998b;14:185–91.

Shpigel E, Goldlust A, Efroni G, Avraham A, Eshel A, Dekel M, Shoseyov O. Immobilization of recombinant heparinase I fused to cellulose-binding domain. Biotechnol Bioeng 1999;65:17–23.

Shpigel E, Goldlust A, Eshel A, Ber IK, Efroni G, Singer Y, Levy I, Dekel M, Shoseyov O. Expression, purification and applications of staphylococcal protein A fused to cellulose-binding domain. Biotechnol Appl Biochem 2000;31:197–203.

Siegel DL, Shoseyov O. Method of releasing solid matrix affinity adsorbed particulates. US patent 6,184,011, 2001. Skerra A. Engineered protein scaffolds for molecular recognition. J Mol Recognit 2000;13:167–87. Smith GP, Patel SU, Windass JD, Thornton JM, Winter G, Griffiths AD. Small binding proteins selected from a combinatorial repertoire of knottins displayed on phage. J Mol Biol 1998;277:317–32.

Spence E. Encyclopedia of polymer science and technology, 2nd ed, Vol. 10. New York: Wily-Interscience, 1987. p. 761–86. Stahl S, Uhlen M. Bacterial surface display: trends and progress. Trends Biotechnol 1997;15:185–92. Stalbrand H, Saloheimo A, Vehmaanpera J, Henrissat B, Penttila M. Cloning and expression in Saccharomyces cerevisiae of a

Trichoderma reesei beta-mannanase gene containing a cellulose-binding domain. Appl Environ Microbiol 1995;61:1090–7.

Stempfer G, Holl-Neu gebauer B, Rudolph R. Improved refoldin g of an immobilized fusion protein. Nat Biotechn ol 1996;14:329–34.

Suter M, Butler JE. The immunochemistry of sandwich ELISAs. I. A novel system prevents the denaturation of capture antibodies. Immunol Lett 1986;13:313–6.

Suurnakki A, Tenkanen M, Siika-aho M, Niku-Paavola ML, Viikari L, Buchert J. Trichoderma reesei cellulases and their core domains in the hydrolysis and modification of chemical pulp. Cellulose 2000;7:189–209.

Swaminathan B, Feng P. Rapid detection of food-borne pathogenic bacteria. Annu Rev Microbiol 1994;48:401–26. Szabo L, Jamal S, Xie H, Charnock SJ, Bolam DN, Gilbert HJ, Davies GJ. Structure of a family 15 carbohydrate-binding module in complex with xylopentaose: evidence that xylan binds in an approximate three-fold helical conformation. J Biol Chem 2001;276:49061–5.

Teeri T, Koivula A, Linder M, Wohlfahrt G, Divne C, Jones TA. Trichoderma reesei cellobiohydrolases: why so efficient on crystalline cellulose? Biochem Soc Trans 1998;26:173–8.

Tomme P, Van Tilbeurgh H, Pettersson G, Van Damme J, Vandekerckhove J, Knowles J, Teeri Claeyssens M. Studies of the cellulolytic system of Trichoderma reesei QM 9414. Analysis of domain function in two cellobiohydrolases by limited proteolysis. Eur J Biochem 1988;170:575–81. Tomme P, Warren RA, Gilkes NR. Cellulose hydrolysis by bacteria and fungi. Adv Microb Physiol 1995a;37:1–81.

Tomme P, Driver DP, Amandoron EA, Miller RC, Antony R, Warren J, Kilburn DG. Comparison of a fungal (family I) and bacterial (family I) cellulose-binding. J Bacteriol 1995b;177:4356–63.

Tomme P, Creagh AL, Kilburn DG, Haynes CA. Interaction of polysaccharides with the N-terminal cellulose-binding domain of

Cellulomonas fimi CenC: 1. Specificity and calorimetric. Biochemistry 1996;35:13885–94.

Tomme P, Boraston A, McLean B, Kormos J, Creagh AL, Sturch K, Gilkes NR, Haynes CA, Warren RA, Kilburn DG.

Characterization and affinity applications of cellulose-binding domains. J Chromatogr, B: Biomed Sci Appl 1998;715: 283–96.

Tormo J, Lamed R, Chirino AJ, Morag E, Bayer EA, Shoham Y, Steitz TA. Crystal structure of a bacterial family-I cellulosebinding domain: a general mechanism for attachment to cellulose. EMBO J 1996;15:5739–51.

Trainotti L, Spolaore S, Pavanello A, Baldan B, Casadoro G. A novel E-type endo-1,4-b-glucanase with a putative cellulosebinding domain is highly expressed in ripening strawberry fruits. Plant Mol Biol 1999;40:323–32.

Turner AP. Biosensors—sense and sensitivity. Science 2000;290:1315–7. Turner RFB, Kilburn DG, Phelps MR. Biosensor and interface membrane. US patent 5,624,537, 1997. Van Tilbeurgh H, Tomme P, Claeyssens M, Bhikhabhai R. Limeted proteolysis of the cellubiohydrolase I from Trichoderma reesei. Separation of functional domains. FEBS Lett 1986;204:223–7.

Villalobos JA. The drying and curing of dry-formed webs. Tappi J 1981;64:129. von der Osten C, Bjornvad ME, Vind J, Rasmussen MD. Process and composition for desizing cellulosic fabric with an enzyme hybrid. US patent 6,017,751, 2000a. von der Osten C, Cherry JR, Bjornvad ME, Vind J, Rasmussen MD. Process for removal or bleaching of soiling or stains from cellulosic fabric. US patent 6,015,783, 2000b.

(Parte 5 de 6)

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